WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34D4.1.1 Sequence Name  C34D4.1.1
Length (nt)  1726   Chromosome Location  IV: 7156628-7160156
Chromosome . Primary Identifier  IV Chromosome Location . Start  7156628
Chromosome Location . End  7160156 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34D4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016397 maph-9 C34D4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34D4.1 C34D4.1 1539   IV: 7156904-7157104

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.1.1 7156628 7160156 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129373   136   IV: 7156628-7156763 Caenorhabditis elegans
Exon129375   205   IV: 7156900-7157104 Caenorhabditis elegans
Exon129376   119   IV: 7157571-7157689 Caenorhabditis elegans
Exon129378   93   IV: 7157739-7157831 Caenorhabditis elegans
Exon129380   348   IV: 7157880-7158227 Caenorhabditis elegans
Exon129382   124   IV: 7158288-7158411 Caenorhabditis elegans
Exon129384   159   IV: 7158463-7158621 Caenorhabditis elegans
Exon129386   146   IV: 7158666-7158811 Caenorhabditis elegans
Exon129388   258   IV: 7159447-7159704 Caenorhabditis elegans
Exon129390   138   IV: 7160019-7160156 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34D4.1.1 7156628 7160156 1

1 Sequence

Length
1726

1 Sequence Ontology Term

Identifier Name Description
transcript