WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C42D4.4.1 Sequence Name  C42D4.4.1
Length (nt)  1035   Chromosome Location  IV: 7177187-7178423
Chromosome . Primary Identifier  IV Chromosome Location . Start  7177187
Chromosome Location . End  7178423 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42D4.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006109 str-44 C42D4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C42D4.4 C42D4.4 1035   IV: 7177187-7177680

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C42D4.4.1 7177187 7178423 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129426   494   IV: 7177187-7177680 Caenorhabditis elegans
Exon129427   67   IV: 7177727-7177793 Caenorhabditis elegans
Exon129428   382   IV: 7177907-7178288 Caenorhabditis elegans
Exon129429   92   IV: 7178332-7178423 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C42D4.4.1 7177187 7178423 1

1 Sequence

Length
1035

1 Sequence Ontology Term

Identifier Name Description
transcript