WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13A1.9.1 Sequence Name  R13A1.9.1
Length (nt)  1705   Chromosome Location  IV: 7193359-7195834
Chromosome . Primary Identifier  IV Chromosome Location . Start  7193359
Chromosome Location . End  7195834 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13A1.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020046 best-16 R13A1.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13A1.9 R13A1.9 1392   IV: 7193520-7193605

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13A1.9.1 7193359 7195834 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129473   247   IV: 7193359-7193605 Caenorhabditis elegans
Exon129474   74   IV: 7193651-7193724 Caenorhabditis elegans
Exon129475   144   IV: 7193776-7193919 Caenorhabditis elegans
Exon129476   146   IV: 7193968-7194113 Caenorhabditis elegans
Exon129477   81   IV: 7194213-7194293 Caenorhabditis elegans
Exon129478   63   IV: 7194341-7194403 Caenorhabditis elegans
Exon129479   84   IV: 7194460-7194543 Caenorhabditis elegans
Exon129480   78   IV: 7194590-7194667 Caenorhabditis elegans
Exon129481   45   IV: 7194719-7194763 Caenorhabditis elegans
Exon129482   183   IV: 7194806-7194988 Caenorhabditis elegans
Exon129483   94   IV: 7195038-7195131 Caenorhabditis elegans
Exon129484   135   IV: 7195176-7195310 Caenorhabditis elegans
Exon129485   331   IV: 7195504-7195834 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13A1.9.1 7193359 7195834 -1

1 Sequence

Length
1705

1 Sequence Ontology Term

Identifier Name Description
transcript