WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R13A1.4b Sequence Name  R13A1.4b
Length (nt)  2331   Chromosome Location  IV: 7197153-7197197
Chromosome . Primary Identifier  IV Chromosome Location . Start  7197153
Chromosome Location . End  7197197
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13A1.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48967 UNC-8, isoform b 88.5 776 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00089753
WBRNAi00051879
WBRNAi00017811
WBRNAi00091324
WBRNAi00103488
WBRNAi00090015
WBRNAi00090174
WBRNAi00090333

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R13A1.4b 7197153 7197197 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006748 unc-8 R13A1.4 Caenorhabditis elegans

20 Locations


Feature . Primary Identifier
Start End Strand
CDS:R13A1.4b 7197153 7197197 1
CDS:R13A1.4b 7197387 7197434 1
CDS:R13A1.4b 7199532 7199645 1
CDS:R13A1.4b 7200161 7200309 1
CDS:R13A1.4b 7200360 7200502 1
CDS:R13A1.4b 7200547 7200629 1
CDS:R13A1.4b 7200686 7200777 1
CDS:R13A1.4b 7200824 7200962 1
CDS:R13A1.4b 7201047 7201133 1
CDS:R13A1.4b 7201176 7201313 1
CDS:R13A1.4b 7201358 7201459 1
CDS:R13A1.4b 7201507 7201664 1
CDS:R13A1.4b 7201709 7201809 1
CDS:R13A1.4b 7201873 7202033 1
CDS:R13A1.4b 7202079 7202171 1
CDS:R13A1.4b 7202216 7202333 1
CDS:R13A1.4b 7202706 7202849 1
CDS:R13A1.4b 7202896 7203035 1
CDS:R13A1.4b 7203172 7203267 1
CDS:R13A1.4b 7203319 7203498 1

1 Sequence

Length
2331

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R13A1.4b.1 R13A1.4b.1 2331   IV: 7197153-7203498