WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R13A1.2d Sequence Name  R13A1.2d
Length (nt)  3297   Chromosome Location  IV: 7207407-7207471
Chromosome . Primary Identifier  IV Chromosome Location . Start  7207407
Chromosome Location . End  7207471
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13A1.2d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48440 KCC-1, isoform d 121.1 1098 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00051877
WBRNAi00017810
WBRNAi00017813
WBRNAi00034907
WBRNAi00000826

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R13A1.2d 7207407 7207471 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006504 kcc-1 R13A1.2 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:R13A1.2d 7207407 7207471 1
CDS:R13A1.2d 7209915 7210004 1
CDS:R13A1.2d 7210064 7210119 1
CDS:R13A1.2d 7213644 7213954 1
CDS:R13A1.2d 7214046 7214286 1
CDS:R13A1.2d 7214333 7214442 1
CDS:R13A1.2d 7214493 7214578 1
CDS:R13A1.2d 7214628 7214720 1
CDS:R13A1.2d 7214767 7215180 1
CDS:R13A1.2d 7215233 7215625 1
CDS:R13A1.2d 7215680 7216037 1
CDS:R13A1.2d 7216096 7217065 1
CDS:R13A1.2d 7217115 7217224 1

1 Sequence

Length
3297

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R13A1.2d.1 R13A1.2d.1 3297   IV: 7207407-7217224