WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13A1.8.1 Sequence Name  R13A1.8.1
Length (nt)  1086   Chromosome Location  IV: 7218049-7219498
Chromosome . Primary Identifier  IV Chromosome Location . Start  7218049
Chromosome Location . End  7219498 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13A1.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020045 glb-23 R13A1.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13A1.8 R13A1.8 1029   IV: 7218093-7218198

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13A1.8.1 7218049 7219498 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129640   150   IV: 7218049-7218198 Caenorhabditis elegans
Exon129641   125   IV: 7218245-7218369 Caenorhabditis elegans
Exon129642   306   IV: 7218425-7218730 Caenorhabditis elegans
Exon129643   252   IV: 7218800-7219051 Caenorhabditis elegans
Exon129644   132   IV: 7219097-7219228 Caenorhabditis elegans
Exon129645   121   IV: 7219378-7219498 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13A1.8.1 7218049 7219498 -1

1 Sequence

Length
1086

1 Sequence Ontology Term

Identifier Name Description
transcript