WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13A1.1.1 Sequence Name  R13A1.1.1
Length (nt)  315   Chromosome Location  IV: 7220037-7220723
Chromosome . Primary Identifier  IV Chromosome Location . Start  7220037
Chromosome Location . End  7220723 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13A1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020041 R13A1.1 R13A1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13A1.1 R13A1.1 132   IV: 7220104-7220168

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13A1.1.1 7220037 7220723 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129646   132   IV: 7220037-7220168 Caenorhabditis elegans
Exon129647   46   IV: 7220487-7220532 Caenorhabditis elegans
Exon129648   137   IV: 7220587-7220723 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13A1.1.1 7220037 7220723 1

1 Sequence

Length
315

1 Sequence Ontology Term

Identifier Name Description
transcript