WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2024.5a.1 Sequence Name  D2024.5a.1
Length (nt)  708   Chromosome Location  IV: 7227274-7228306
Chromosome . Primary Identifier  IV Chromosome Location . Start  7227274
Chromosome Location . End  7228306 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2024.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017053 D2024.5 D2024.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2024.5a D2024.5a 501   IV: 7227481-7227507

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2024.5a.1 7227274 7228306 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129654   234   IV: 7227274-7227507 Caenorhabditis elegans
Exon129659   109   IV: 7227696-7227804 Caenorhabditis elegans
Exon129663   126   IV: 7227854-7227979 Caenorhabditis elegans
Exon129667   115   IV: 7228024-7228138 Caenorhabditis elegans
Exon129671   124   IV: 7228183-7228306 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2024.5a.1 7227274 7228306 -1

1 Sequence

Length
708

1 Sequence Ontology Term

Identifier Name Description
transcript