WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2024.5b.3 Sequence Name  D2024.5b.3
Length (nt)  819   Chromosome Location  IV: 7227275-7228308
Chromosome . Primary Identifier  IV Chromosome Location . Start  7227275
Chromosome Location . End  7228308 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2024.5b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017053 D2024.5 D2024.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2024.5b D2024.5b 492   IV: 7227600-7227617

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2024.5b.3 7227275 7228308 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129655   343   IV: 7227275-7227617 Caenorhabditis elegans
Exon129662   109   IV: 7227696-7227804 Caenorhabditis elegans
Exon129666   126   IV: 7227854-7227979 Caenorhabditis elegans
Exon129670   115   IV: 7228024-7228138 Caenorhabditis elegans
Exon129674   126   IV: 7228183-7228308 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2024.5b.3 7227275 7228308 -1

1 Sequence

Length
819

1 Sequence Ontology Term

Identifier Name Description
transcript