WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13A1.10.1 Sequence Name  R13A1.10.1
Length (nt)  1020   Chromosome Location  IV: 7225358-7227172
Chromosome . Primary Identifier  IV Chromosome Location . Start  7225358
Chromosome Location . End  7227172 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13A1.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044504 R13A1.10 R13A1.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13A1.10 R13A1.10 954   IV: 7225416-7225637

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13A1.10.1 7225358 7227172 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129704   280   IV: 7225358-7225637 Caenorhabditis elegans
Exon129705   135   IV: 7225806-7225940 Caenorhabditis elegans
Exon129706   529   IV: 7226300-7226828 Caenorhabditis elegans
Exon129707   76   IV: 7227097-7227172 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13A1.10.1 7225358 7227172 -1

1 Sequence

Length
1020

1 Sequence Ontology Term

Identifier Name Description
transcript