WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2024.8.1 Sequence Name  D2024.8.1
Length (nt)  1024   Chromosome Location  IV: 7245460-7246653
Chromosome . Primary Identifier  IV Chromosome Location . Start  7245460
Chromosome Location . End  7246653 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2024.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000688 col-114 D2024.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2024.8 D2024.8 966   IV: 7245505-7245929

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2024.8.1 7245460 7246653 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129708   470   IV: 7245460-7245929 Caenorhabditis elegans
Exon129709   187   IV: 7245975-7246161 Caenorhabditis elegans
Exon129711   186   IV: 7246211-7246396 Caenorhabditis elegans
Exon129712   181   IV: 7246473-7246653 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2024.8.1 7245460 7246653 -1

1 Sequence

Length
1024

1 Sequence Ontology Term

Identifier Name Description
transcript