WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2024.1.1 Sequence Name  D2024.1.1
Length (nt)  1233   Chromosome Location  IV: 7247543-7249590
Chromosome . Primary Identifier  IV Chromosome Location . Start  7247543
Chromosome Location . End  7249590 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2024.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017050 D2024.1 D2024.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2024.1 D2024.1 1080   IV: 7247543-7247604

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2024.1.1 7247543 7249590 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129713   62   IV: 7247543-7247604 Caenorhabditis elegans
Exon129714   142   IV: 7248184-7248325 Caenorhabditis elegans
Exon129715   200   IV: 7248374-7248573 Caenorhabditis elegans
Exon129716   265   IV: 7248618-7248882 Caenorhabditis elegans
Exon129717   136   IV: 7248931-7249066 Caenorhabditis elegans
Exon129718   166   IV: 7249114-7249279 Caenorhabditis elegans
Exon129719   262   IV: 7249329-7249590 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2024.1.1 7247543 7249590 1

1 Sequence

Length
1233

1 Sequence Ontology Term

Identifier Name Description
transcript