WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F42C5.3a Sequence Name  F42C5.3a
Length (nt)  867   Chromosome Location  IV: 7286182-7286319
Chromosome . Primary Identifier  IV Chromosome Location . Start  7286182
Chromosome Location . End  7286319
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42C5.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47655 F42C5.3, isoform a 34.0 288 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00047084
WBRNAi00014815
WBRNAi00032133
WBRNAi00070113

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F42C5.3a 7286182 7286319 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018345 F42C5.3 F42C5.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F42C5.3a 7286182 7286319 -1
CDS:F42C5.3a 7286468 7286536 -1
CDS:F42C5.3a 7286585 7286704 -1
CDS:F42C5.3a 7286748 7286981 -1
CDS:F42C5.3a 7287176 7287370 -1
CDS:F42C5.3a 7287416 7287526 -1

1 Sequence

Length
867

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F42C5.3a.1 F42C5.3a.1 1000   IV: 7286097-7287574