WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42C5.6.1 Sequence Name  F42C5.6.1
Length (nt)  535   Chromosome Location  IV: 7308445-7309074
Chromosome . Primary Identifier  IV Chromosome Location . Start  7308445
Chromosome Location . End  7309074 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42C5.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018348 F42C5.6 F42C5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42C5.6 F42C5.6 477   IV: 7308486-7308680

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42C5.6.1 7308445 7309074 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon129821   236   IV: 7308445-7308680 Caenorhabditis elegans
Exon129822   141   IV: 7308728-7308868 Caenorhabditis elegans
Exon129823   158   IV: 7308917-7309074 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42C5.6.1 7308445 7309074 -1

1 Sequence

Length
535

1 Sequence Ontology Term

Identifier Name Description
transcript