WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F42C5.10 Sequence Name  F42C5.10
Length (nt)  3879   Chromosome Location  IV: 7320891-7321060
Chromosome . Primary Identifier  IV Chromosome Location . Start  7320891
Chromosome Location . End  7321060
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42C5.10

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28393 IFO-1 148.4 1292 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00095618
WBRNAi00047082
WBRNAi00091112
WBRNAi00091143
WBRNAi00091142
WBRNAi00091145
WBRNAi00091144
WBRNAi00008785
WBRNAi00025475
WBRNAi00088599
WBRNAi00088706

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F42C5.10 7320891 7321060 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018350 ifo-1 F42C5.10 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:F42C5.10 7320891 7321060 -1
CDS:F42C5.10 7321141 7321326 -1
CDS:F42C5.10 7321378 7321460 -1
CDS:F42C5.10 7321508 7321646 -1
CDS:F42C5.10 7321694 7322188 -1
CDS:F42C5.10 7322236 7322484 -1
CDS:F42C5.10 7322533 7322952 -1
CDS:F42C5.10 7323284 7324283 -1
CDS:F42C5.10 7324382 7324478 -1
CDS:F42C5.10 7324521 7325326 -1
CDS:F42C5.10 7325745 7325810 -1
CDS:F42C5.10 7326444 7326518 -1
CDS:F42C5.10 7326570 7326662 -1

1 Sequence

Length
3879

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F42C5.10.1 F42C5.10.1 4037   IV: 7320734-7326663