WormMine: MRNA Transcript:Y40C5A.3q.1

• WormMine ID: Transcript:Y40C5A.3q.1
• Sequence Name: Y40C5A.3q.1
• Length (nt): 4239
• Chromosome Location: IV: 7333638-7346851
• Chromosome . Primary Identifier: IV
• Chromosome Location . Start: 7333638
• Chromosome Location . End: 7346851
• Method: Coding_transcript

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: Y40C5A.3q.1

Genomics

1 Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00021496	daf-42	Y40C5A.3	Caenorhabditis elegans

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:Y40C5A.3q	Y40C5A.3q	4239	IV: 7333638-7333683

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: Transcript:Y40C5A.3q.1
• Start: 7333638
• End: 7346851
• Strand: -1

3 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)
• WormBase C. elegans transcript sequence (Fasta)

23 Exons

WormBase ID	Name	Sequence Name	Length (nt)	Chromosome Location	Organism
Exon129894			46	IV: 7333638-7333683	Caenorhabditis elegans
Exon129911			77	IV: 7333730-7333806	Caenorhabditis elegans
Exon129928			396	IV: 7333858-7334253	Caenorhabditis elegans
Exon129945			271	IV: 7334332-7334602	Caenorhabditis elegans
Exon129962			63	IV: 7334684-7334746	Caenorhabditis elegans
Exon129971			87	IV: 7334947-7335033	Caenorhabditis elegans
Exon129981			60	IV: 7335084-7335143	Caenorhabditis elegans
Exon129991			39	IV: 7335224-7335262	Caenorhabditis elegans
Exon130008			150	IV: 7335561-7335710	Caenorhabditis elegans
Exon130025			223	IV: 7335755-7335977	Caenorhabditis elegans
Exon130042			345	IV: 7336025-7336369	Caenorhabditis elegans
Exon130056			39	IV: 7336522-7336560	Caenorhabditis elegans
Exon130073			75	IV: 7336664-7336738	Caenorhabditis elegans
Exon130104			1131	IV: 7339843-7340973	Caenorhabditis elegans
Exon130122			63	IV: 7341121-7341183	Caenorhabditis elegans
Exon130137			606	IV: 7341492-7342097	Caenorhabditis elegans
Exon130153			69	IV: 7342157-7342225	Caenorhabditis elegans
Exon130170			43	IV: 7342323-7342365	Caenorhabditis elegans
Exon130187			98	IV: 7342452-7342549	Caenorhabditis elegans
Exon130200			141	IV: 7342719-7342859	Caenorhabditis elegans
Exon130217			94	IV: 7342964-7343057	Caenorhabditis elegans
Exon130235			37	IV: 7343105-7343141	Caenorhabditis elegans
Exon130257			86	IV: 7346766-7346851	Caenorhabditis elegans

1 Locations

• Feature . Primary Identifier: Transcript:Y40C5A.3q.1
• Start: 7333638
• End: 7346851
• Strand: -1

1 Sequence

• Length: 4239

1 Sequence Ontology Term

• Name: transcript