WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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CDS :

WormMine ID  CDS:Y40C5A.3f Sequence Name  Y40C5A.3f
Length (nt)  4251   Chromosome Location  IV: 7333638-7333683
Chromosome . Primary Identifier  IV Chromosome Location . Start  7333638
Chromosome Location . End  7333683
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40C5A.3f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49538 DAF-42, isoform f 149.4 1416 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00056325
WBRNAi00020446
WBRNAi00020447
WBRNAi00020449
WBRNAi00020451
WBRNAi00059962
WBRNAi00059961
WBRNAi00059963
WBRNAi00059964

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y40C5A.3f 7333638 7333683 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021496 daf-42 Y40C5A.3 Caenorhabditis elegans

21 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y40C5A.3f 7333638 7333683 -1
CDS:Y40C5A.3f 7333730 7333806 -1
CDS:Y40C5A.3f 7333858 7334253 -1
CDS:Y40C5A.3f 7334332 7334602 -1
CDS:Y40C5A.3f 7334684 7334746 -1
CDS:Y40C5A.3f 7335561 7335710 -1
CDS:Y40C5A.3f 7335755 7335977 -1
CDS:Y40C5A.3f 7336025 7336369 -1
CDS:Y40C5A.3f 7336522 7336560 -1
CDS:Y40C5A.3f 7336664 7336738 -1
CDS:Y40C5A.3f 7336784 7336981 -1
CDS:Y40C5A.3f 7339843 7340973 -1
CDS:Y40C5A.3f 7341121 7341183 -1
CDS:Y40C5A.3f 7341492 7342097 -1
CDS:Y40C5A.3f 7342157 7342225 -1
CDS:Y40C5A.3f 7342323 7342365 -1
CDS:Y40C5A.3f 7342452 7342549 -1
CDS:Y40C5A.3f 7342719 7342859 -1
CDS:Y40C5A.3f 7342964 7343057 -1
CDS:Y40C5A.3f 7343105 7343141 -1
CDS:Y40C5A.3f 7346766 7346851 -1

1 Sequence

Length
4251

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y40C5A.3f.1 Y40C5A.3f.1 4251   IV: 7333638-7346851