WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12B3.2.1 Sequence Name  T12B3.2.1
Length (nt)  1611   Chromosome Location  IV: 7376811-7378911
Chromosome . Primary Identifier  IV Chromosome Location . Start  7376811
Chromosome Location . End  7378911 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12B3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020445 T12B3.2 T12B3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12B3.2 T12B3.2 1437   IV: 7376905-7377122

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12B3.2.1 7376811 7378911 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon130333   312   IV: 7376811-7377122 Caenorhabditis elegans
Exon130334   210   IV: 7377174-7377383 Caenorhabditis elegans
Exon130335   652   IV: 7377677-7378328 Caenorhabditis elegans
Exon130336   258   IV: 7378426-7378683 Caenorhabditis elegans
Exon130337   179   IV: 7378733-7378911 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12B3.2.1 7376811 7378911 1

1 Sequence

Length
1611

1 Sequence Ontology Term

Identifier Name Description
transcript