WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12B3.4a.1 Sequence Name  T12B3.4a.1
Length (nt)  1220   Chromosome Location  IV: 7384756-7388943
Chromosome . Primary Identifier  IV Chromosome Location . Start  7384756
Chromosome Location . End  7388943 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12B3.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020447 mob-3 T12B3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12B3.4a T12B3.4a 879   IV: 7385080-7385157

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12B3.4a.1 7384756 7388943 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon130349   402   IV: 7384756-7385157 Caenorhabditis elegans
Exon130352   203   IV: 7385578-7385780 Caenorhabditis elegans
Exon130356   61   IV: 7385833-7385893 Caenorhabditis elegans
Exon130360   167   IV: 7385994-7386160 Caenorhabditis elegans
Exon130364   151   IV: 7386215-7386365 Caenorhabditis elegans
Exon130368   151   IV: 7386689-7386839 Caenorhabditis elegans
Exon130374   85   IV: 7388859-7388943 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12B3.4a.1 7384756 7388943 -1

1 Sequence

Length
1220

1 Sequence Ontology Term

Identifier Name Description
transcript