WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0496.3a.2 Sequence Name  B0496.3a.2
Length (nt)  4770   Chromosome Location  IV: 7428920-7444664
Chromosome . Primary Identifier  IV Chromosome Location . Start  7428920
Chromosome Location . End  7444664 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0496.3a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006814 unc-82 B0496.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0496.3a B0496.3a 4452   IV: 7428934-7429045

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0496.3a.2 7428920 7444664 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon130504   126   IV: 7428920-7429045 Caenorhabditis elegans
Exon130516   137   IV: 7431865-7432001 Caenorhabditis elegans
Exon130526   121   IV: 7432245-7432365 Caenorhabditis elegans
Exon130536   257   IV: 7432409-7432665 Caenorhabditis elegans
Exon130546   214   IV: 7432713-7432926 Caenorhabditis elegans
Exon130556   512   IV: 7433037-7433548 Caenorhabditis elegans
Exon130568   101   IV: 7434389-7434489 Caenorhabditis elegans
Exon130578   322   IV: 7435832-7436153 Caenorhabditis elegans
Exon130588   120   IV: 7436436-7436555 Caenorhabditis elegans
Exon130598   417   IV: 7436651-7437067 Caenorhabditis elegans
Exon130616   143   IV: 7437479-7437621 Caenorhabditis elegans
Exon130626   194   IV: 7437666-7437859 Caenorhabditis elegans
Exon130636   117   IV: 7437938-7438054 Caenorhabditis elegans
Exon130643   136   IV: 7438188-7438323 Caenorhabditis elegans
Exon130659   147   IV: 7438752-7438898 Caenorhabditis elegans
Exon130665   35   IV: 7439056-7439090 Caenorhabditis elegans
Exon130675   164   IV: 7439138-7439301 Caenorhabditis elegans
Exon130685   65   IV: 7440282-7440346 Caenorhabditis elegans
Exon130695   73   IV: 7440754-7440826 Caenorhabditis elegans
Exon130705   98   IV: 7442034-7442131 Caenorhabditis elegans
Exon130715   134   IV: 7442180-7442313 Caenorhabditis elegans
Exon130725   323   IV: 7442361-7442683 Caenorhabditis elegans
Exon130736   60   IV: 7442838-7442897 Caenorhabditis elegans
Exon130762   275   IV: 7443520-7443794 Caenorhabditis elegans
Exon130773   71   IV: 7444138-7444208 Caenorhabditis elegans
Exon130792   408   IV: 7444257-7444664 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0496.3a.2 7428920 7444664 1

1 Sequence

Length
4770

1 Sequence Ontology Term

Identifier Name Description
transcript