WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0496.3e.1 Sequence Name  B0496.3e.1
Length (nt)  5384   Chromosome Location  IV: 7424498-7444360
Chromosome . Primary Identifier  IV Chromosome Location . Start  7424498
Chromosome Location . End  7444360 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0496.3e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006814 unc-82 B0496.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0496.3e B0496.3e 5382   IV: 7424500-7424797

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0496.3e.1 7424498 7444360 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

34 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon130520   300   IV: 7424498-7424797 Caenorhabditis elegans
Exon130523   111   IV: 7424860-7424970 Caenorhabditis elegans
Exon130525   166   IV: 7425020-7425185 Caenorhabditis elegans
Exon130527   67   IV: 7425692-7425758 Caenorhabditis elegans
Exon130533   67   IV: 7425811-7425877 Caenorhabditis elegans
Exon130541   120   IV: 7428926-7429045 Caenorhabditis elegans
Exon130553   137   IV: 7431865-7432001 Caenorhabditis elegans
Exon130563   121   IV: 7432245-7432365 Caenorhabditis elegans
Exon130573   257   IV: 7432409-7432665 Caenorhabditis elegans
Exon130583   214   IV: 7432713-7432926 Caenorhabditis elegans
Exon130593   512   IV: 7433037-7433548 Caenorhabditis elegans
Exon130605   101   IV: 7434389-7434489 Caenorhabditis elegans
Exon130615   322   IV: 7435832-7436153 Caenorhabditis elegans
Exon130625   120   IV: 7436436-7436555 Caenorhabditis elegans
Exon130635   417   IV: 7436651-7437067 Caenorhabditis elegans
Exon130643   123   IV: 7437265-7437387 Caenorhabditis elegans
Exon130653   143   IV: 7437479-7437621 Caenorhabditis elegans
Exon130663   194   IV: 7437666-7437859 Caenorhabditis elegans
Exon130673   117   IV: 7437938-7438054 Caenorhabditis elegans
Exon130680   136   IV: 7438188-7438323 Caenorhabditis elegans
Exon130696   147   IV: 7438752-7438898 Caenorhabditis elegans
Exon130702   35   IV: 7439056-7439090 Caenorhabditis elegans
Exon130712   164   IV: 7439138-7439301 Caenorhabditis elegans
Exon130722   65   IV: 7440282-7440346 Caenorhabditis elegans
Exon130732   73   IV: 7440754-7440826 Caenorhabditis elegans
Exon130742   98   IV: 7442034-7442131 Caenorhabditis elegans
Exon130752   134   IV: 7442180-7442313 Caenorhabditis elegans
Exon130762   323   IV: 7442361-7442683 Caenorhabditis elegans
Exon130774   60   IV: 7442838-7442897 Caenorhabditis elegans
Exon130784   60   IV: 7443052-7443111 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0496.3e.1 7424498 7444360 1

1 Sequence

Length
5384

1 Sequence Ontology Term

Identifier Name Description
transcript