WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0496.3g.1 Sequence Name  B0496.3g.1
Length (nt)  4878   Chromosome Location  IV: 7425729-7444660
Chromosome . Primary Identifier  IV Chromosome Location . Start  7425729
Chromosome Location . End  7444660 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0496.3g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006814 unc-82 B0496.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0496.3g B0496.3g 4473   IV: 7428934-7429045

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0496.3g.1 7425729 7444660 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

30 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon130529   30   IV: 7425729-7425758 Caenorhabditis elegans
Exon130534   67   IV: 7425811-7425877 Caenorhabditis elegans
Exon130542   120   IV: 7428926-7429045 Caenorhabditis elegans
Exon130555   137   IV: 7431865-7432001 Caenorhabditis elegans
Exon130565   121   IV: 7432245-7432365 Caenorhabditis elegans
Exon130575   257   IV: 7432409-7432665 Caenorhabditis elegans
Exon130585   214   IV: 7432713-7432926 Caenorhabditis elegans
Exon130595   512   IV: 7433037-7433548 Caenorhabditis elegans
Exon130607   101   IV: 7434389-7434489 Caenorhabditis elegans
Exon130617   322   IV: 7435832-7436153 Caenorhabditis elegans
Exon130627   120   IV: 7436436-7436555 Caenorhabditis elegans
Exon130637   417   IV: 7436651-7437067 Caenorhabditis elegans
Exon130645   123   IV: 7437265-7437387 Caenorhabditis elegans
Exon130655   143   IV: 7437479-7437621 Caenorhabditis elegans
Exon130665   194   IV: 7437666-7437859 Caenorhabditis elegans
Exon130682   136   IV: 7438188-7438323 Caenorhabditis elegans
Exon130688   72   IV: 7438527-7438598 Caenorhabditis elegans
Exon130704   35   IV: 7439056-7439090 Caenorhabditis elegans
Exon130714   164   IV: 7439138-7439301 Caenorhabditis elegans
Exon130724   65   IV: 7440282-7440346 Caenorhabditis elegans
Exon130734   73   IV: 7440754-7440826 Caenorhabditis elegans
Exon130744   98   IV: 7442034-7442131 Caenorhabditis elegans
Exon130754   134   IV: 7442180-7442313 Caenorhabditis elegans
Exon130764   323   IV: 7442361-7442683 Caenorhabditis elegans
Exon130776   60   IV: 7442838-7442897 Caenorhabditis elegans
Exon130785   60   IV: 7443052-7443111 Caenorhabditis elegans
Exon130793   30   IV: 7443198-7443227 Caenorhabditis elegans
Exon130802   275   IV: 7443520-7443794 Caenorhabditis elegans
Exon130813   71   IV: 7444138-7444208 Caenorhabditis elegans
Exon130823   404   IV: 7444257-7444660 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0496.3g.1 7425729 7444660 1

1 Sequence

Length
4878

1 Sequence Ontology Term

Identifier Name Description
transcript