WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0496.3i.1 Sequence Name  B0496.3i.1
Length (nt)  4788   Chromosome Location  IV: 7431348-7444360
Chromosome . Primary Identifier  IV Chromosome Location . Start  7431348
Chromosome Location . End  7444360 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0496.3i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006814 unc-82 B0496.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0496.3i B0496.3i 4788   IV: 7431348-7431510

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0496.3i.1 7431348 7444360 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

30 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon130547   163   IV: 7431348-7431510 Caenorhabditis elegans
Exon130558   137   IV: 7431865-7432001 Caenorhabditis elegans
Exon130568   121   IV: 7432245-7432365 Caenorhabditis elegans
Exon130578   257   IV: 7432409-7432665 Caenorhabditis elegans
Exon130588   214   IV: 7432713-7432926 Caenorhabditis elegans
Exon130598   512   IV: 7433037-7433548 Caenorhabditis elegans
Exon130610   101   IV: 7434389-7434489 Caenorhabditis elegans
Exon130620   322   IV: 7435832-7436153 Caenorhabditis elegans
Exon130630   120   IV: 7436436-7436555 Caenorhabditis elegans
Exon130640   417   IV: 7436651-7437067 Caenorhabditis elegans
Exon130648   123   IV: 7437265-7437387 Caenorhabditis elegans
Exon130658   143   IV: 7437479-7437621 Caenorhabditis elegans
Exon130668   194   IV: 7437666-7437859 Caenorhabditis elegans
Exon130675   117   IV: 7437938-7438054 Caenorhabditis elegans
Exon130685   136   IV: 7438188-7438323 Caenorhabditis elegans
Exon130691   72   IV: 7438527-7438598 Caenorhabditis elegans
Exon130697   147   IV: 7438752-7438898 Caenorhabditis elegans
Exon130707   35   IV: 7439056-7439090 Caenorhabditis elegans
Exon130717   164   IV: 7439138-7439301 Caenorhabditis elegans
Exon130727   65   IV: 7440282-7440346 Caenorhabditis elegans
Exon130737   73   IV: 7440754-7440826 Caenorhabditis elegans
Exon130747   98   IV: 7442034-7442131 Caenorhabditis elegans
Exon130757   134   IV: 7442180-7442313 Caenorhabditis elegans
Exon130767   323   IV: 7442361-7442683 Caenorhabditis elegans
Exon130779   60   IV: 7442838-7442897 Caenorhabditis elegans
Exon130788   60   IV: 7443052-7443111 Caenorhabditis elegans
Exon130794   30   IV: 7443198-7443227 Caenorhabditis elegans
Exon130805   275   IV: 7443520-7443794 Caenorhabditis elegans
Exon130816   71   IV: 7444138-7444208 Caenorhabditis elegans
Exon130820   104   IV: 7444257-7444360 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0496.3i.1 7431348 7444360 1

1 Sequence

Length
4788

1 Sequence Ontology Term

Identifier Name Description
transcript