WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55G1.6.1 Sequence Name  F55G1.6.1
Length (nt)  1251   Chromosome Location  IV: 7473517-7474959
Chromosome . Primary Identifier  IV Chromosome Location . Start  7473517
Chromosome Location . End  7474959 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55G1.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018902 F55G1.6 F55G1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55G1.6 F55G1.6 1053   IV: 7473582-7473665

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55G1.6.1 7473517 7474959 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon130855   149   IV: 7473517-7473665 Caenorhabditis elegans
Exon130856   104   IV: 7473710-7473813 Caenorhabditis elegans
Exon130857   244   IV: 7473870-7474113 Caenorhabditis elegans
Exon130858   244   IV: 7474159-7474402 Caenorhabditis elegans
Exon130859   510   IV: 7474450-7474959 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55G1.6.1 7473517 7474959 1

1 Sequence

Length
1251

1 Sequence Ontology Term

Identifier Name Description
transcript