WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05G6.4.1 Sequence Name  R05G6.4.1
Length (nt)  1026   Chromosome Location  IV: 7513233-7514407
Chromosome . Primary Identifier  IV Chromosome Location . Start  7513233
Chromosome Location . End  7514407 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05G6.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019898 R05G6.4 R05G6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05G6.4 R05G6.4 933   IV: 7513236-7513307

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R05G6.4.1 7513233 7514407 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon130949   75   IV: 7513233-7513307 Caenorhabditis elegans
Exon130950   342   IV: 7513360-7513701 Caenorhabditis elegans
Exon130951   338   IV: 7513750-7514087 Caenorhabditis elegans
Exon130952   271   IV: 7514137-7514407 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R05G6.4.1 7513233 7514407 1

1 Sequence

Length
1026

1 Sequence Ontology Term

Identifier Name Description
transcript