WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05G6.9.1 Sequence Name  R05G6.9.1
Length (nt)  1302   Chromosome Location  IV: 7514366-7516267
Chromosome . Primary Identifier  IV Chromosome Location . Start  7514366
Chromosome Location . End  7516267 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05G6.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019901 R05G6.9 R05G6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05G6.9 R05G6.9 1137   IV: 7514491-7514753

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R05G6.9.1 7514366 7516267 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon130953   388   IV: 7514366-7514753 Caenorhabditis elegans
Exon130954   123   IV: 7514801-7514923 Caenorhabditis elegans
Exon130955   252   IV: 7514973-7515224 Caenorhabditis elegans
Exon130957   261   IV: 7515682-7515942 Caenorhabditis elegans
Exon130958   278   IV: 7515990-7516267 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R05G6.9.1 7514366 7516267 -1

1 Sequence

Length
1302

1 Sequence Ontology Term

Identifier Name Description
transcript