WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05G6.10c.1 Sequence Name  R05G6.10c.1
Length (nt)  1855   Chromosome Location  IV: 7517458-7542535
Chromosome . Primary Identifier  IV Chromosome Location . Start  7517458
Chromosome Location . End  7542535 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05G6.10c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019902 R05G6.10 R05G6.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05G6.10c R05G6.10c 1644   IV: 7517669-7517754

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R05G6.10c.1 7517458 7542535 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon130962   297   IV: 7517458-7517754 Caenorhabditis elegans
Exon130968   355   IV: 7517809-7518163 Caenorhabditis elegans
Exon130973   130   IV: 7518339-7518468 Caenorhabditis elegans
Exon130978   251   IV: 7518513-7518763 Caenorhabditis elegans
Exon130983   93   IV: 7518818-7518910 Caenorhabditis elegans
Exon130988   85   IV: 7519287-7519371 Caenorhabditis elegans
Exon130993   143   IV: 7519418-7519560 Caenorhabditis elegans
Exon130997   171   IV: 7519712-7519882 Caenorhabditis elegans
Exon131001   108   IV: 7520258-7520365 Caenorhabditis elegans
Exon131006   66   IV: 7528590-7528655 Caenorhabditis elegans
Exon131011   123   IV: 7532630-7532752 Caenorhabditis elegans
Exon131036   33   IV: 7542503-7542535 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R05G6.10c.1 7517458 7542535 -1

1 Sequence

Length
1855

1 Sequence Ontology Term

Identifier Name Description
transcript