WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05G6.10b.1 Sequence Name  R05G6.10b.1
Length (nt)  1137   Chromosome Location  IV: 7517669-7519554
Chromosome . Primary Identifier  IV Chromosome Location . Start  7517669
Chromosome Location . End  7519554 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05G6.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019902 R05G6.10 R05G6.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05G6.10b R05G6.10b 1137   IV: 7517669-7517754

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R05G6.10b.1 7517669 7519554 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon130963   86   IV: 7517669-7517754 Caenorhabditis elegans
Exon130967   355   IV: 7517809-7518163 Caenorhabditis elegans
Exon130972   130   IV: 7518339-7518468 Caenorhabditis elegans
Exon130977   251   IV: 7518513-7518763 Caenorhabditis elegans
Exon130982   93   IV: 7518818-7518910 Caenorhabditis elegans
Exon130987   85   IV: 7519287-7519371 Caenorhabditis elegans
Exon130991   137   IV: 7519418-7519554 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R05G6.10b.1 7517669 7519554 -1

1 Sequence

Length
1137

1 Sequence Ontology Term

Identifier Name Description
transcript