WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F49E8.3b Sequence Name  F49E8.3b
Length (nt)  2847   Chromosome Location  IV: 7544140-7544226
Chromosome . Primary Identifier  IV Chromosome Location . Start  7544140
Chromosome Location . End  7544226
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E8.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37649 PAM-1, isoform b 107.1 948 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00062566
WBRNAi00047869
WBRNAi00047870
WBRNAi00076453
WBRNAi00032551
WBRNAi00089085
WBRNAi00008824

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F49E8.3b 7544140 7544226 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003914 pam-1 F49E8.3 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F49E8.3b 7544140 7544226 -1
CDS:F49E8.3b 7544273 7544933 -1
CDS:F49E8.3b 7544980 7545908 -1
CDS:F49E8.3b 7545954 7546188 -1
CDS:F49E8.3b 7546265 7546903 -1
CDS:F49E8.3b 7547013 7547117 -1
CDS:F49E8.3b 7550045 7550189 -1
CDS:F49E8.3b 7550759 7550804 -1

1 Sequence

Length
2847

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F49E8.3b.1 F49E8.3b.1 2847   IV: 7544140-7550804