WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E8.2a.1 Sequence Name  F49E8.2a.1
Length (nt)  1367   Chromosome Location  IV: 7548417-7551519
Chromosome . Primary Identifier  IV Chromosome Location . Start  7548417
Chromosome Location . End  7551519 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E8.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018636 oef-1 F49E8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E8.2a F49E8.2a 1125   IV: 7548558-7548650

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49E8.2a.1 7548417 7551519 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131065   234   IV: 7548417-7548650 Caenorhabditis elegans
Exon131067   192   IV: 7548694-7548885 Caenorhabditis elegans
Exon131069   109   IV: 7548938-7549046 Caenorhabditis elegans
Exon131071   107   IV: 7549091-7549197 Caenorhabditis elegans
Exon131073   230   IV: 7549241-7549470 Caenorhabditis elegans
Exon131075   190   IV: 7549522-7549711 Caenorhabditis elegans
Exon131082   154   IV: 7550874-7551027 Caenorhabditis elegans
Exon131084   151   IV: 7551369-7551519 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49E8.2a.1 7548417 7551519 1

1 Sequence

Length
1367

1 Sequence Ontology Term

Identifier Name Description
transcript