WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F49E8.5 Sequence Name  F49E8.5
Length (nt)  939   Chromosome Location  IV: 7551738-7551887
Chromosome . Primary Identifier  IV Chromosome Location . Start  7551738
Chromosome Location . End  7551887
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E8.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28408 DIF-1 33.1 312 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00047872
WBRNAi00015334
WBRNAi00030258
WBRNAi00077274
WBRNAi00077288
WBRNAi00047873
WBRNAi00090632

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F49E8.5 7551738 7551887 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000996 dif-1 F49E8.5 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:F49E8.5 7551738 7551887 -1
CDS:F49E8.5 7552002 7552495 -1
CDS:F49E8.5 7552570 7552864 -1

1 Sequence

Length
939

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F49E8.5.2 F49E8.5.2 1158   IV: 7551560-7553008
Transcript:F49E8.5.1 F49E8.5.1 1030   IV: 7551657-7552874