WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F49E8.1a Sequence Name  F49E8.1a
Length (nt)  1302   Chromosome Location  IV: 7557209-7557425
Chromosome . Primary Identifier  IV Chromosome Location . Start  7557209
Chromosome Location . End  7557425
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E8.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33650 NPRL-2, isoform a 49.7 433 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00047868
WBRNAi00015331
WBRNAi00032550
WBRNAi00061819

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F49E8.1a 7557209 7557425 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018635 nprl-2 F49E8.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F49E8.1a 7557209 7557425 1
CDS:F49E8.1a 7557470 7557781 1
CDS:F49E8.1a 7557826 7558322 1
CDS:F49E8.1a 7558377 7558528 1
CDS:F49E8.1a 7558573 7558696 1

1 Sequence

Length
1302

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F49E8.1a.1 F49E8.1a.1 1395   IV: 7557181-7558761