WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32E10.3a.1 Sequence Name  F32E10.3a.1
Length (nt)  2800   Chromosome Location  IV: 7568893-7573766
Chromosome . Primary Identifier  IV Chromosome Location . Start  7568893
Chromosome Location . End  7573766 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32E10.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017991 clec-180 F32E10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32E10.3a F32E10.3a 2631   IV: 7568945-7569055

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32E10.3a.1 7568893 7573766 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131132   163   IV: 7568893-7569055 Caenorhabditis elegans
Exon131134   162   IV: 7569980-7570141 Caenorhabditis elegans
Exon131136   60   IV: 7570200-7570259 Caenorhabditis elegans
Exon131138   74   IV: 7570307-7570380 Caenorhabditis elegans
Exon131140   169   IV: 7570568-7570736 Caenorhabditis elegans
Exon131142   279   IV: 7570791-7571069 Caenorhabditis elegans
Exon131144   527   IV: 7571389-7571915 Caenorhabditis elegans
Exon131146   139   IV: 7571960-7572098 Caenorhabditis elegans
Exon131150   118   IV: 7572144-7572261 Caenorhabditis elegans
Exon131154   122   IV: 7572598-7572719 Caenorhabditis elegans
Exon131159   987   IV: 7572780-7573766 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32E10.3a.1 7568893 7573766 1

1 Sequence

Length
2800

1 Sequence Ontology Term

Identifier Name Description
transcript