WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45E4.3b.1 Sequence Name  F45E4.3b.1
Length (nt)  25584   Chromosome Location  IV: 7588931-7623552
Chromosome . Primary Identifier  IV Chromosome Location . Start  7588931
Chromosome Location . End  7623552 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E4.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018468 cla-1 F45E4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45E4.3b F45E4.3b 25584   IV: 7588931-7588956

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45E4.3b.1 7588931 7623552 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

33 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131244   26   IV: 7588931-7588956 Caenorhabditis elegans
Exon131247   79   IV: 7589013-7589091 Caenorhabditis elegans
Exon131249   226   IV: 7589206-7589431 Caenorhabditis elegans
Exon131251   129   IV: 7589843-7589971 Caenorhabditis elegans
Exon131253   170   IV: 7590021-7590190 Caenorhabditis elegans
Exon131255   245   IV: 7590239-7590483 Caenorhabditis elegans
Exon131257   98   IV: 7590530-7590627 Caenorhabditis elegans
Exon131259   5888   IV: 7590673-7596560 Caenorhabditis elegans
Exon131261   621   IV: 7596625-7597245 Caenorhabditis elegans
Exon131263   1675   IV: 7597249-7598923 Caenorhabditis elegans
Exon131265   6695   IV: 7598928-7605622 Caenorhabditis elegans
Exon131268   113   IV: 7605698-7605810 Caenorhabditis elegans
Exon131270   207   IV: 7606453-7606659 Caenorhabditis elegans
Exon131272   153   IV: 7606708-7606860 Caenorhabditis elegans
Exon131274   2485   IV: 7607950-7610434 Caenorhabditis elegans
Exon131276   113   IV: 7610650-7610762 Caenorhabditis elegans
Exon131280   62   IV: 7610836-7610897 Caenorhabditis elegans
Exon131284   69   IV: 7611276-7611344 Caenorhabditis elegans
Exon131288   314   IV: 7611439-7611752 Caenorhabditis elegans
Exon131292   45   IV: 7612643-7612687 Caenorhabditis elegans
Exon131296   50   IV: 7612960-7613009 Caenorhabditis elegans
Exon131300   48   IV: 7613055-7613102 Caenorhabditis elegans
Exon131304   417   IV: 7613223-7613639 Caenorhabditis elegans
Exon131308   513   IV: 7614014-7614526 Caenorhabditis elegans
Exon131312   285   IV: 7614574-7614858 Caenorhabditis elegans
Exon131316   349   IV: 7615133-7615481 Caenorhabditis elegans
Exon131320   190   IV: 7615730-7615919 Caenorhabditis elegans
Exon131324   85   IV: 7615964-7616048 Caenorhabditis elegans
Exon131328   209   IV: 7616487-7616695 Caenorhabditis elegans
Exon131332   581   IV: 7616752-7617332 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45E4.3b.1 7588931 7623552 1

1 Sequence

Length
25584

1 Sequence Ontology Term

Identifier Name Description
transcript