WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F45E4.3c Sequence Name  F45E4.3c
Length (nt)  6744   Chromosome Location  IV: 7610680-7610762
Chromosome . Primary Identifier  IV Chromosome Location . Start  7610680
Chromosome Location . End  7610762
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E4.3c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49484 CLA-1, isoform c 250.7 2247 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00047408
WBRNAi00080492
WBRNAi00015022
WBRNAi00032305

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F45E4.3c 7610680 7610762 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018468 cla-1 F45E4.3 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:F45E4.3c 7610680 7610762 1
CDS:F45E4.3c 7610836 7610897 1
CDS:F45E4.3c 7611276 7611344 1
CDS:F45E4.3c 7611439 7611752 1
CDS:F45E4.3c 7612643 7612687 1
CDS:F45E4.3c 7612960 7613009 1
CDS:F45E4.3c 7613055 7613102 1
CDS:F45E4.3c 7613223 7613639 1
CDS:F45E4.3c 7614014 7614526 1
CDS:F45E4.3c 7614574 7614858 1
CDS:F45E4.3c 7615133 7615481 1
CDS:F45E4.3c 7615730 7615919 1
CDS:F45E4.3c 7615964 7616048 1
CDS:F45E4.3c 7616487 7616695 1
CDS:F45E4.3c 7616752 7617332 1
CDS:F45E4.3c 7617424 7618127 1
CDS:F45E4.3c 7618837 7619038 1
CDS:F45E4.3c 7621015 7623552 1

1 Sequence

Length
6744

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F45E4.3c.1 F45E4.3c.1 6744   IV: 7610680-7623552