WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45E4.5a.1 Sequence Name  F45E4.5a.1
Length (nt)  550   Chromosome Location  IV: 7628166-7629042
Chromosome . Primary Identifier  IV Chromosome Location . Start  7628166
Chromosome Location . End  7629042 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E4.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018470 F45E4.5 F45E4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45E4.5a F45E4.5a 327   IV: 7628335-7628362

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45E4.5a.1 7628166 7629042 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131318   197   IV: 7628166-7628362 Caenorhabditis elegans
Exon131322   123   IV: 7628444-7628566 Caenorhabditis elegans
Exon131327   139   IV: 7628769-7628907 Caenorhabditis elegans
Exon131331   91   IV: 7628952-7629042 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45E4.5a.1 7628166 7629042 -1

1 Sequence

Length
550

1 Sequence Ontology Term

Identifier Name Description
transcript