WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F45E4.7b Sequence Name  F45E4.7b
Length (nt)  1518   Chromosome Location  IV: 7635793-7635936
Chromosome . Primary Identifier  IV Chromosome Location . Start  7635793
Chromosome Location . End  7635936
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E4.7b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33648 NEP-16, isoform b 58.3 505 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00047411
WBRNAi00073094
WBRNAi00032307

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F45E4.7b 7635793 7635936 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018472 nep-16 F45E4.7 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F45E4.7b 7635793 7635936 -1
CDS:F45E4.7b 7635980 7636418 -1
CDS:F45E4.7b 7636839 7637183 -1
CDS:F45E4.7b 7637244 7637333 -1
CDS:F45E4.7b 7637381 7637679 -1
CDS:F45E4.7b 7637877 7637990 -1
CDS:F45E4.7b 7638037 7638123 -1

1 Sequence

Length
1518

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F45E4.7b.1 F45E4.7b.1 1722   IV: 7635653-7638187