WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45E4.7c.1 Sequence Name  F45E4.7c.1
Length (nt)  2375   Chromosome Location  IV: 7635793-7640288
Chromosome . Primary Identifier  IV Chromosome Location . Start  7635793
Chromosome Location . End  7640288 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E4.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018472 nep-16 F45E4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45E4.7c F45E4.7c 2355   IV: 7635793-7635936

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45E4.7c.1 7635793 7640288 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131350   144   IV: 7635793-7635936 Caenorhabditis elegans
Exon131353   439   IV: 7635980-7636418 Caenorhabditis elegans
Exon131356   345   IV: 7636839-7637183 Caenorhabditis elegans
Exon131360   90   IV: 7637244-7637333 Caenorhabditis elegans
Exon131363   299   IV: 7637381-7637679 Caenorhabditis elegans
Exon131366   114   IV: 7637877-7637990 Caenorhabditis elegans
Exon131368   106   IV: 7638037-7638142 Caenorhabditis elegans
Exon131372   99   IV: 7638356-7638454 Caenorhabditis elegans
Exon131374   94   IV: 7638981-7639074 Caenorhabditis elegans
Exon131376   150   IV: 7639127-7639276 Caenorhabditis elegans
Exon131378   161   IV: 7639321-7639481 Caenorhabditis elegans
Exon131380   232   IV: 7639889-7640120 Caenorhabditis elegans
Exon131381   102   IV: 7640187-7640288 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45E4.7c.1 7635793 7640288 -1

1 Sequence

Length
2375

1 Sequence Ontology Term

Identifier Name Description
transcript