WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45E4.10b.1 Sequence Name  F45E4.10b.1
Length (nt)  2503   Chromosome Location  IV: 7646323-7654262
Chromosome . Primary Identifier  IV Chromosome Location . Start  7646323
Chromosome Location . End  7654262 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E4.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001584 nrde-4 F45E4.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45E4.10b F45E4.10b 2358   IV: 7646419-7646733

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45E4.10b.1 7646323 7654262 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131394   411   IV: 7646323-7646733 Caenorhabditis elegans
Exon131396   326   IV: 7647027-7647352 Caenorhabditis elegans
Exon131398   89   IV: 7647399-7647487 Caenorhabditis elegans
Exon131400   176   IV: 7647538-7647713 Caenorhabditis elegans
Exon131402   339   IV: 7647762-7648100 Caenorhabditis elegans
Exon131404   119   IV: 7648545-7648663 Caenorhabditis elegans
Exon131406   76   IV: 7648709-7648784 Caenorhabditis elegans
Exon131408   114   IV: 7648846-7648959 Caenorhabditis elegans
Exon131410   309   IV: 7649008-7649316 Caenorhabditis elegans
Exon131412   379   IV: 7649969-7650347 Caenorhabditis elegans
Exon131413   74   IV: 7650395-7650468 Caenorhabditis elegans
Exon131424   91   IV: 7654172-7654262 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45E4.10b.1 7646323 7654262 -1

1 Sequence

Length
2503

1 Sequence Ontology Term

Identifier Name Description
transcript