WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33D4.4.2 Sequence Name  F33D4.4.2
Length (nt)  1420   Chromosome Location  IV: 7703874-7706905
Chromosome . Primary Identifier  IV Chromosome Location . Start  7703874
Chromosome Location . End  7706905 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33D4.4.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017996 F33D4.4 F33D4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33D4.4 F33D4.4 1083   IV: 7704208-7704264

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33D4.4.2 7703874 7706905 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131653   391   IV: 7703874-7704264 Caenorhabditis elegans
Exon131655   198   IV: 7704618-7704815 Caenorhabditis elegans
Exon131657   94   IV: 7705482-7705575 Caenorhabditis elegans
Exon131659   419   IV: 7705630-7706048 Caenorhabditis elegans
Exon131661   125   IV: 7706543-7706667 Caenorhabditis elegans
Exon131663   193   IV: 7706713-7706905 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33D4.4.2 7703874 7706905 -1

1 Sequence

Length
1420

1 Sequence Ontology Term

Identifier Name Description
transcript