WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F33D4.1a Sequence Name  F33D4.1a
Length (nt)  1683   Chromosome Location  IV: 7711149-7711229
Chromosome . Primary Identifier  IV Chromosome Location . Start  7711149
Chromosome Location . End  7711229
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33D4.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33927 NHR-8, isoform a 63.3 560 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00103050
WBRNAi00103051
WBRNAi00064727
WBRNAi00046202
WBRNAi00064843
WBRNAi00014244
WBRNAi00065598
WBRNAi00103048
WBRNAi00103049
WBRNAi00027858
WBRNAi00111954
WBRNAi00114726
WBRNAi00065596
WBRNAi00065597
WBRNAi00090633
WBRNAi00023453

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F33D4.1a 7711149 7711229 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003607 nhr-8 F33D4.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F33D4.1a 7711149 7711229 1
CDS:F33D4.1a 7711778 7711870 1
CDS:F33D4.1a 7711919 7712211 1
CDS:F33D4.1a 7712537 7712633 1
CDS:F33D4.1a 7712680 7712887 1
CDS:F33D4.1a 7713091 7713291 1
CDS:F33D4.1a 7713338 7713808 1
CDS:F33D4.1a 7713856 7713925 1
CDS:F33D4.1a 7714001 7714169 1

1 Sequence

Length
1683

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F33D4.1a.1 F33D4.1a.1 1878   IV: 7710983-7714198