WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F33D4.5 Sequence Name  F33D4.5
Length (nt)  1134   Chromosome Location  IV: 7707684-7707776
Chromosome . Primary Identifier  IV Chromosome Location . Start  7707684
Chromosome Location . End  7707776
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33D4.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29308 MRPL-1 42.7 377 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00078650
WBRNAi00046206
WBRNAi00046207
WBRNAi00093620
WBRNAi00071423
WBRNAi00078562
WBRNAi00025377
WBRNAi00031718
WBRNAi00008744
WBRNAi00109865
WBRNAi00110840

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F33D4.5 7707684 7707776 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017997 mrpl-1 F33D4.5 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F33D4.5 7707684 7707776 -1
CDS:F33D4.5 7707944 7708673 -1
CDS:F33D4.5 7708723 7708948 -1
CDS:F33D4.5 7708999 7709083 -1

1 Sequence

Length
1134

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F33D4.5.2 F33D4.5.2 1521   IV: 7707574-7709701
Transcript:F33D4.5.1 F33D4.5.1 1244   IV: 7707575-7709084