WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50F7.9.1 Sequence Name  C50F7.9.1
Length (nt)  897   Chromosome Location  IV: 7730669-7732060
Chromosome . Primary Identifier  IV Chromosome Location . Start  7730669
Chromosome Location . End  7732060 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50F7.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016847 C50F7.9 C50F7.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50F7.9 C50F7.9 897   IV: 7730669-7730887

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50F7.9.1 7730669 7732060 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131742   219   IV: 7730669-7730887 Caenorhabditis elegans
Exon131743   161   IV: 7730931-7731091 Caenorhabditis elegans
Exon131744   97   IV: 7731137-7731233 Caenorhabditis elegans
Exon131745   120   IV: 7731301-7731420 Caenorhabditis elegans
Exon131746   117   IV: 7731467-7731583 Caenorhabditis elegans
Exon131747   84   IV: 7731786-7731869 Caenorhabditis elegans
Exon131748   99   IV: 7731962-7732060 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50F7.9.1 7730669 7732060 -1

1 Sequence

Length
897

1 Sequence Ontology Term

Identifier Name Description
transcript