WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50F7.3.1 Sequence Name  C50F7.3.1
Length (nt)  1038   Chromosome Location  IV: 7732329-7734230
Chromosome . Primary Identifier  IV Chromosome Location . Start  7732329
Chromosome Location . End  7734230 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50F7.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016843 C50F7.3 C50F7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50F7.3 C50F7.3 942   IV: 7732372-7732383

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C50F7.3.1 7732329 7734230 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131749   55   IV: 7732329-7732383 Caenorhabditis elegans
Exon131750   102   IV: 7732517-7732618 Caenorhabditis elegans
Exon131751   60   IV: 7732663-7732722 Caenorhabditis elegans
Exon131752   74   IV: 7732769-7732842 Caenorhabditis elegans
Exon131753   40   IV: 7732937-7732976 Caenorhabditis elegans
Exon131754   159   IV: 7733039-7733197 Caenorhabditis elegans
Exon131755   105   IV: 7733243-7733347 Caenorhabditis elegans
Exon131756   239   IV: 7733395-7733633 Caenorhabditis elegans
Exon131758   204   IV: 7734027-7734230 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C50F7.3.1 7732329 7734230 1

1 Sequence

Length
1038

1 Sequence Ontology Term

Identifier Name Description
transcript