WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C50F7.1b Sequence Name  C50F7.1b
Length (nt)  1155   Chromosome Location  IV: 7743897-7744185
Chromosome . Primary Identifier  IV Chromosome Location . Start  7743897
Chromosome Location . End  7744185
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50F7.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54589 NPR-35, isoform b 44.3 384 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00042952
WBRNAi00072201
WBRNAi00012242
WBRNAi00030050

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C50F7.1b 7743897 7744185 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016842 npr-35 C50F7.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C50F7.1b 7743897 7744185 1
CDS:C50F7.1b 7744454 7744683 1
CDS:C50F7.1b 7744730 7744912 1
CDS:C50F7.1b 7745058 7745210 1
CDS:C50F7.1b 7745256 7745383 1
CDS:C50F7.1b 7745545 7745716 1

1 Sequence

Length
1155

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C50F7.1b.1 C50F7.1b.1 1583   IV: 7743839-7746086