WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C46A5.9 Sequence Name  C46A5.9
Length (nt)  2349   Chromosome Location  IV: 7771206-7771346
Chromosome . Primary Identifier  IV Chromosome Location . Start  7771206
Chromosome Location . End  7771346
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46A5.9

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26914 HCF-1 87.3 782 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00042584
WBRNAi00012019
WBRNAi00081780
WBRNAi00081815
WBRNAi00081844
WBRNAi00062165
WBRNAi00088935
WBRNAi00081891
WBRNAi00108483
WBRNAi00108478

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C46A5.9 7771206 7771346 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001827 hcf-1 C46A5.9 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C46A5.9 7771206 7771346 -1
CDS:C46A5.9 7771738 7772043 -1
CDS:C46A5.9 7772178 7772891 -1
CDS:C46A5.9 7772947 7773908 -1
CDS:C46A5.9 7773954 7774054 -1
CDS:C46A5.9 7774101 7774177 -1
CDS:C46A5.9 7774223 7774270 -1

1 Sequence

Length
2349

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C46A5.9.1 C46A5.9.1 2790   IV: 7770770-7774275