WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33H5.7.1 Sequence Name  C33H5.7.1
Length (nt)  1362   Chromosome Location  IV: 7774411-7776038
Chromosome . Primary Identifier  IV Chromosome Location . Start  7774411
Chromosome Location . End  7776038 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33H5.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016374 swd-2.2 C33H5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33H5.7 C33H5.7 981   IV: 7774541-7774600

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33H5.7.1 7774411 7776038 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131865   190   IV: 7774411-7774600 Caenorhabditis elegans
Exon131866   214   IV: 7774658-7774871 Caenorhabditis elegans
Exon131867   67   IV: 7774927-7774993 Caenorhabditis elegans
Exon131868   333   IV: 7775043-7775375 Caenorhabditis elegans
Exon131869   256   IV: 7775426-7775681 Caenorhabditis elegans
Exon131870   302   IV: 7775737-7776038 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33H5.7.1 7774411 7776038 1

1 Sequence

Length
1362

1 Sequence Ontology Term

Identifier Name Description
transcript