WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33H5.6.1 Sequence Name  C33H5.6.1
Length (nt)  1119   Chromosome Location  IV: 7776025-7778022
Chromosome . Primary Identifier  IV Chromosome Location . Start  7776025
Chromosome Location . End  7778022 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33H5.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016373 swd-2.1 C33H5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33H5.6 C33H5.6 969   IV: 7776025-7776090

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33H5.6.1 7776025 7778022 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131871   66   IV: 7776025-7776090 Caenorhabditis elegans
Exon131872   126   IV: 7776137-7776262 Caenorhabditis elegans
Exon131873   249   IV: 7776309-7776557 Caenorhabditis elegans
Exon131874   291   IV: 7776912-7777202 Caenorhabditis elegans
Exon131875   387   IV: 7777636-7778022 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33H5.6.1 7776025 7778022 1

1 Sequence

Length
1119

1 Sequence Ontology Term

Identifier Name Description
transcript