WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33H5.11a.1 Sequence Name  C33H5.11a.1
Length (nt)  1765   Chromosome Location  IV: 7785999-7789462
Chromosome . Primary Identifier  IV Chromosome Location . Start  7785999
Chromosome Location . End  7789462 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33H5.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016378 imp-3 C33H5.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33H5.11a C33H5.11a 1551   IV: 7786198-7786306

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33H5.11a.1 7785999 7789462 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131892   308   IV: 7785999-7786306 Caenorhabditis elegans
Exon131897   220   IV: 7786355-7786574 Caenorhabditis elegans
Exon131900   237   IV: 7786885-7787121 Caenorhabditis elegans
Exon131903   104   IV: 7787170-7787273 Caenorhabditis elegans
Exon131906   83   IV: 7787741-7787823 Caenorhabditis elegans
Exon131909   227   IV: 7787877-7788103 Caenorhabditis elegans
Exon131913   201   IV: 7788339-7788539 Caenorhabditis elegans
Exon131915   103   IV: 7788757-7788859 Caenorhabditis elegans
Exon131917   159   IV: 7789130-7789288 Caenorhabditis elegans
Exon131919   123   IV: 7789340-7789462 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33H5.11a.1 7785999 7789462 -1

1 Sequence

Length
1765

1 Sequence Ontology Term

Identifier Name Description
transcript