WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33H5.11d.1 Sequence Name  C33H5.11d.1
Length (nt)  1915   Chromosome Location  IV: 7786000-7789613
Chromosome . Primary Identifier  IV Chromosome Location . Start  7786000
Chromosome Location . End  7789613 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33H5.11d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016378 imp-3 C33H5.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33H5.11d C33H5.11d 1593   IV: 7786198-7786306

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33H5.11d.1 7786000 7789613 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon131893   307   IV: 7786000-7786306 Caenorhabditis elegans
Exon131899   220   IV: 7786355-7786574 Caenorhabditis elegans
Exon131902   237   IV: 7786885-7787121 Caenorhabditis elegans
Exon131905   104   IV: 7787170-7787273 Caenorhabditis elegans
Exon131908   83   IV: 7787741-7787823 Caenorhabditis elegans
Exon131911   227   IV: 7787877-7788103 Caenorhabditis elegans
Exon131914   201   IV: 7788339-7788539 Caenorhabditis elegans
Exon131916   103   IV: 7788757-7788859 Caenorhabditis elegans
Exon131918   159   IV: 7789130-7789288 Caenorhabditis elegans
Exon131920   274   IV: 7789340-7789613 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33H5.11d.1 7786000 7789613 -1

1 Sequence

Length
1915

1 Sequence Ontology Term

Identifier Name Description
transcript